Publication Search Results
Exact matches for:
- Author = Lin DM
1.
Fu X, Lin Y, Lin DM, Mechtersheimer D, Wang C, Ameen F, Ghazanfar S, Patrick E, Yang YH
Xiaohang Fu, Yingxin Lin, David M. Lin, Daniel Mechtersheimer, Chuhan Wang, Farhan Ameen, Shila Ghazanfar, Ellis Patrick, Jinman Kim & Jean Y. H. Yang:
BIDCell: Biologically-informed self-supervised learning for segmentation of subcellular spatial transcriptomics data,
Nature Communications,
15
(2024),
Article 509 (17 pages).
2.
Lin Y, Loo L, Tran A, Lin DM, Moreno C, Hesselson D, Neely GG, Yang YH
Yingxin Lin,Lipin Loo,Andy Tran,David M. Lin,Cesar Moreno,Daniel Hesselson,G. Gregory Neely,Jean Y. H. Yang:
Scalable workflow for characterization of cell-cell communication in COVID-19 patients,
PLoS Computational Biology,
18
(2022),
10.
3.
Ghazanfar S, Lin Y, Su X, Lin DM, Patrick E, Han ZG, Marioni JC, Yang YH
Shila Ghazanfar, Yingxin Lin, Xianbin Su, David M Lin, Ellis Patrick, Ze Guang Han, John C Marioni and Jean Yee Hwa Yang:
Investigating higher-order interactions in single-cell data with scHOT,
Nature Methods,
17
(2020),
799–806.
4.
Lin Y, Cao Y, Kim HJ, Salim A, Speed TP, Lin DM, Yang P, Yang YH
Yingxin Lin, Yue Cao, Hani Jieun Kim, Agus Salim, Terence P Speed, David M Lin, Pengyi Yang, Jean Yee Hwa Yang:
scClassify: sample size estimation and multiscale classification of cells using single and multiple reference,
Molecular Systems Biology,
16
(2020),
e9389.
5.
Lin Y, Ghazanfar S, Strbenac D, Wang A, Patrick E, Lin DM, Speed T, Yang YH, Yang P
Yingxin Lin, Shila Ghazanfar, Dario Strbenac, Andy Wang, Ellis Patrick, David M Lin, Terence Speed, Jean YH Yang, Pengyi Yang:
Evaluating stably expressed genes in single cells,
GigaScience,
8
(2019),
no. 9,
giz106.
6.
Bisogni AJ, Ghazanfar S, Williams EO, Marsh HM, Yang YH, Lin DM
A.J. Bisogni and S. Ghazanfar and E. O. Williams and H.M. Marsh and J. Y. H. Yang and D.M. Lin:
Tuning of delta-protocadherin adhesion through combinatorial diversity,
Elife,
7
(2018),
EPub.
7.
Ghazanfar S, Bisogni AJ, Ormerod JT, Lin DM, Yang YH
Shila Ghazanfar, Adam J. Bisogni, John T. Ormerod, David M. Lin, and Jean Y. H. Yang:
Integrated single cell data analysis reveals cell specific networks and novel coactivation markers,
BMC Systems Biology,
10
(2016),
no. S5,
11–24.
8.
Patrick E, Buckley MJ, Muller S, Lin DM, Yang YH
E Patrick, M Buckley, S Müller, DM Lin, YH Yang:
Inferring data-specific micro-RNA function through the joint ranking of micro-RNA and pathways from small sample miRNA-Seq and mRNA-Seq data,
Bioinformatics,
31
(2015),
no. 17,
2822–2828.
9.
Patrick E, Buckley MJ, Lin DM, Yang YH
Ellis Patrick, Michael Buckley, David Ming Lin, Yee Hwa Yang:
Improved moderation for gene-wise variance estimation in RNA-Seq via the exploitation of external information,
BMC Genomics,
14
(2013),
no. Supplement 1,
1–9.
10.
Lin DM, Yang YH, Scolnick J, Brunet L, Marsh M, Peng V, Okazaki Y
Lin D, Yang Y. H., Scolnick J., Brunet L., Marsh M., Peng V., Okazaki Y.,:
Spatial patterns of gene expression in the olfactory bulb.,
PNAS,,
101
(2004),
no. 34,
12718–12723.
11.
Yang YH, Dudoit S, Luu P, Lin DM, Peng V, Ngai J, Speed TP
Yang YH, Dudoit S, Luu P, Lin DM, Peng V, Ngai J and Speed TP:
Normalization for cDNA microarray data: a composite method addressing local, global and multiple slide systematic variation.,
Nucleic Acid Research,
30
(2002),
no. 4,
E15.
| Number of matches: 11 |